STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI80250.1Uncharacterized protein. (410 aa)    
Predicted Functional Partners:
SSCI84720.1
Uncharacterized protein.
    
 0.967
SSCI38270.1
Serine/threonine-protein kinase.
    
 0.966
SSCI11920.1
Uncharacterized protein.
    
 
 0.925
SSCI36490.1
Uncharacterized protein.
    
 0.897
SSCI15350.1
Related to DNA-damage inducible protein 2.
    
 
 0.896
SSCI42810.1
Uncharacterized protein.
    
 
 0.872
SSCI61120.1
Protein kinase domain-containing protein.
    
 
 0.872
SSCI74040.1
Uncharacterized protein.
    
 
 0.845
SSCI74050.1
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.845
SSCI29130.1
Uncharacterized protein.
    
 
 0.786
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
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