STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSCI85690.1Malate dehydrogenase. (340 aa)    
Predicted Functional Partners:
SSCI59970.1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.981
SSCI47120.1
Aspartate aminotransferase.
   
 0.971
SSCI31500.1
Probable aspartate aminotransferase, cytoplasmic.
   
 0.957
SSCI45180.1
Uncharacterized protein.
  
 0.956
SSCI24240.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 0.949
SSCI09330.1
Uncharacterized protein.
  
 0.942
SSCI42170.1
Malate synthase; Belongs to the malate synthase family.
   
 0.932
SSCI18910.1
Uncharacterized protein.
  
 0.924
SSCI79620.1
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
   
 0.914
SSCI03040.1
Probable ARG4-arginosuccinate lyase.
   
 0.911
Your Current Organism:
Sporisorium scitamineum
NCBI taxonomy Id: 49012
Other names: S. scitamineum, Sporisorium scitamineum (Syd.) M. Piepenbr., M. Stoll & Oberw., 2002, Ustilago scitaminea, Ustilago scitaminea Syd.
Server load: low (26%) [HD]