STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG44915.1Cyclopropane-fatty-acyl-phospholipid synthase. (350 aa)    
Predicted Functional Partners:
SHG44929.1
Steroid 5-alpha reductase family enzyme.
     0.969
SHG44886.1
Hypothetical protein.
       0.811
SHG66989.1
Predicted NAD/FAD-binding protein.
 
  
 0.793
SHG66969.1
Hypothetical protein.
  
 0.785
SHG44858.1
Thioredoxin-like.
       0.747
SHH27584.1
Steroid 5-alpha reductase family enzyme.
 
     0.740
SHG52910.1
Apolipoprotein D and lipocalin family protein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.
 
     0.626
SHG42047.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
  
 
 0.565
SHG44791.1
Acyl-coenzyme A thioesterase PaaI, contains HGG motif.
       0.525
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
       0.523
Your Current Organism:
Hydrocarboniphaga daqingensis
NCBI taxonomy Id: 490188
Other names: CGMCC 1.7049, H. daqingensis, Hydrocarboniphaga daqingensis Liu et al. 2011, Hydrocarboniphaga sp. B2-9, NBRC 104238, strain B2-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.