STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG45864.1Hypothetical protein. (310 aa)    
Predicted Functional Partners:
SHG45038.1
3-oxoacyl-[acyl-carrier-protein] synthase-3.
 
  
 0.788
SHG98739.1
Amino acid adenylation domain-containing protein.
  
 0.709
SHG84360.1
Luciferase family oxidoreductase, group 1.
  
  
  0.694
SHG52547.1
Cysteine synthase B; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 
  0.639
SHG95448.1
NADH dehydrogenase.
    
 0.613
msrP
Sulfoxide reductase catalytic subunit YedY; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to re [...]
  
 
  0.605
SHG51160.1
Sulfite reductase (NADPH) hemoprotein beta-component.
    
 0.599
SHG45883.1
Uncharacterized zinc-type alcohol dehydrogenase-like protein.
       0.591
SHG45846.1
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
   0.575
SHG53895.1
Cytochrome c.
  
  
  0.477
Your Current Organism:
Hydrocarboniphaga daqingensis
NCBI taxonomy Id: 490188
Other names: CGMCC 1.7049, H. daqingensis, Hydrocarboniphaga daqingensis Liu et al. 2011, Hydrocarboniphaga sp. B2-9, NBRC 104238, strain B2-9
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.