Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHG50658.1 | SHG52562.1 | SAMN04488068_0490 | SAMN04488068_0585 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Two-component system, NarL family, sensor histidine kinase BarA. | 0.987 |
| SHG50658.1 | SHG53094.1 | SAMN04488068_0490 | SAMN04488068_0610 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.994 |
| SHG50658.1 | SHG67898.1 | SAMN04488068_0490 | SAMN04488068_1064 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | PAS domain S-box-containing protein. | 0.992 |
| SHG50658.1 | SHG87315.1 | SAMN04488068_0490 | SAMN04488068_1781 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.988 |
| SHG50658.1 | SHG92964.1 | SAMN04488068_0490 | SAMN04488068_1861 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.988 |
| SHG50658.1 | SHH04892.1 | SAMN04488068_0490 | SAMN04488068_2294 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Type IV pilus assembly protein PilZ. | 0.988 |
| SHG50658.1 | SHH05990.1 | SAMN04488068_0490 | SAMN04488068_2351 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Signal transduction histidine kinase. | 0.986 |
| SHG50658.1 | SHH06708.1 | SAMN04488068_0490 | SAMN04488068_2387 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.990 |
| SHG50658.1 | SHH15007.1 | SAMN04488068_0490 | SAMN04488068_2699 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | GAF domain-containing protein. | 0.986 |
| SHG50658.1 | SHH24367.1 | SAMN04488068_0490 | SAMN04488068_3048 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.982 |
| SHG52562.1 | SHG50658.1 | SAMN04488068_0585 | SAMN04488068_0490 | Two-component system, NarL family, sensor histidine kinase BarA. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.987 |
| SHG52562.1 | SHG53094.1 | SAMN04488068_0585 | SAMN04488068_0610 | Two-component system, NarL family, sensor histidine kinase BarA. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.998 |
| SHG52562.1 | SHG67898.1 | SAMN04488068_0585 | SAMN04488068_1064 | Two-component system, NarL family, sensor histidine kinase BarA. | PAS domain S-box-containing protein. | 0.999 |
| SHG52562.1 | SHG87315.1 | SAMN04488068_0585 | SAMN04488068_1781 | Two-component system, NarL family, sensor histidine kinase BarA. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.970 |
| SHG52562.1 | SHG92964.1 | SAMN04488068_0585 | SAMN04488068_1861 | Two-component system, NarL family, sensor histidine kinase BarA. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.968 |
| SHG52562.1 | SHH05990.1 | SAMN04488068_0585 | SAMN04488068_2351 | Two-component system, NarL family, sensor histidine kinase BarA. | Signal transduction histidine kinase. | 0.999 |
| SHG52562.1 | SHH06708.1 | SAMN04488068_0585 | SAMN04488068_2387 | Two-component system, NarL family, sensor histidine kinase BarA. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.973 |
| SHG52562.1 | SHH15007.1 | SAMN04488068_0585 | SAMN04488068_2699 | Two-component system, NarL family, sensor histidine kinase BarA. | GAF domain-containing protein. | 0.999 |
| SHG52562.1 | SHH24367.1 | SAMN04488068_0585 | SAMN04488068_3048 | Two-component system, NarL family, sensor histidine kinase BarA. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.997 |
| SHG53094.1 | SHG50658.1 | SAMN04488068_0610 | SAMN04488068_0490 | Diguanylate cyclase (GGDEF) domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.994 |
page 1 of 5