STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG71523.1Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily. (299 aa)    
Predicted Functional Partners:
SHG98482.1
Protein of unknown function.
   
 0.785
SHG71552.1
2,4-dienoyl-CoA reductase (NADPH2).
     
 0.598
SHH04248.1
Cytochrome P450.
  
 0.591
SHH34981.1
Cytochrome P450.
  
 0.588
SHG71504.1
AraC-type DNA-binding protein.
       0.580
SHG70499.1
Protein of unknown function.
   
 0.574
SHG96997.1
3-(3-hydroxy-phenyl)propionate hydroxylase.
   
 0.574
SHH14635.1
2-octaprenylphenol hydroxylase.
   
 0.574
SHH14658.1
2-octaprenyl-6-methoxyphenol hydroxylase.
   
 0.574
SHH04074.1
Hypothetical protein; Belongs to the cytochrome P450 family.
   
 0.533
Your Current Organism:
Hydrocarboniphaga daqingensis
NCBI taxonomy Id: 490188
Other names: CGMCC 1.7049, H. daqingensis, Hydrocarboniphaga daqingensis Liu et al. 2011, Hydrocarboniphaga sp. B2-9, NBRC 104238, strain B2-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.