STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG84858.1Glycosyltransferase, GT2 family. (676 aa)    
Predicted Functional Partners:
SHG99009.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
 
 0.988
SHG93012.1
Glycosyltransferase, GT2 family.
 
 0.887
SHG84954.1
Capsular polysaccharide transport system ATP-binding protein.
 
  
 0.877
SHG84840.1
Hypothetical protein.
       0.813
SHH29228.1
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.807
SHH21003.1
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.791
SHG84662.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.767
SHG93536.1
Nucleotidyl transferase.
  
 0.756
SHG93177.1
Glycosyltransferase, GT2 family.
 
0.753
SHG84965.1
ABC-type polysaccharide/polyol phosphate export permease.
 
  
 0.752
Your Current Organism:
Hydrocarboniphaga daqingensis
NCBI taxonomy Id: 490188
Other names: CGMCC 1.7049, H. daqingensis, Hydrocarboniphaga daqingensis Liu et al. 2011, Hydrocarboniphaga sp. B2-9, NBRC 104238, strain B2-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.