STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG86819.1Uncharacterized conserved protein. (349 aa)    
Predicted Functional Partners:
SHG86834.1
Hypothetical protein.
       0.773
SHG93881.1
Acyl-homoserine-lactone acylase.
  
     0.575
SHG86849.1
Cold shock protein (beta-ribbon, CspA family).
       0.532
SHG86716.1
Alpha/beta hydrolase family protein.
 
     0.495
SHH30688.1
Glutathione S-transferase.
  
     0.483
SHH30753.1
Protein of unknown function.
  
     0.437
SHH30711.1
Glutathione S-transferase.
  
     0.411
Your Current Organism:
Hydrocarboniphaga daqingensis
NCBI taxonomy Id: 490188
Other names: CGMCC 1.7049, H. daqingensis, Hydrocarboniphaga daqingensis Liu et al. 2011, Hydrocarboniphaga sp. B2-9, NBRC 104238, strain B2-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.