STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG93225.1GSCFA family protein. (355 aa)    
Predicted Functional Partners:
SHG99060.1
Cellulase (glycosyl hydrolase family 5); Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.895
SHG99083.1
IPT/TIG domain-containing protein.
   
 0.895
SHG93195.1
Hypothetical protein.
       0.772
SHG66097.1
TonB family C-terminal domain-containing protein.
   
 0.630
SHG83792.1
Ig-like domain (group 2).
   
 0.630
SHG96888.1
Hypothetical protein.
   
 0.630
SHG93177.1
Glycosyltransferase, GT2 family.
 
     0.620
SHG85174.1
Hypothetical protein.
  
    0.594
SHG65894.1
Hypothetical protein.
  
    0.565
SHG85280.1
Sulfotransferase family protein.
  
     0.537
Your Current Organism:
Hydrocarboniphaga daqingensis
NCBI taxonomy Id: 490188
Other names: CGMCC 1.7049, H. daqingensis, Hydrocarboniphaga daqingensis Liu et al. 2011, Hydrocarboniphaga sp. B2-9, NBRC 104238, strain B2-9
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.