STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG96401.1Fission protein ELM1. (346 aa)    
Predicted Functional Partners:
SHG96379.1
Hypothetical protein; Manually curated.
       0.722
SHG96335.1
ATP-binding cassette, subfamily C.
 
     0.708
SHG96356.1
Hypothetical protein.
 
     0.607
SHG96619.1
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.557
SHG96570.1
Hypothetical protein.
 
     0.503
SHG96590.1
Diacylglycerol kinase family enzyme.
 
     0.490
SHG53013.1
Succinate dehydrogenase / fumarate reductase membrane anchor subunit.
  
     0.489
SHH14799.1
Hypothetical protein.
  
     0.475
SHG63651.1
DUF971 family protein.
  
     0.405
SHG96765.1
MobA-like NTP transferase domain-containing protein.
  
     0.404
Your Current Organism:
Hydrocarboniphaga daqingensis
NCBI taxonomy Id: 490188
Other names: CGMCC 1.7049, H. daqingensis, Hydrocarboniphaga daqingensis Liu et al. 2011, Hydrocarboniphaga sp. B2-9, NBRC 104238, strain B2-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.