STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH22523.1Uncharacterized conserved protein, DUF2126 family. (1117 aa)    
Predicted Functional Partners:
SHG46150.1
Hypothetical protein.
 
     0.769
SHG46191.1
Transglutaminase-like enzyme, putative cysteine protease.
 
     0.752
SHG70978.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
    0.733
SHG70956.1
Uncharacterized conserved protein, Alpha-E superfamily.
 
  
 0.715
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.608
SHH08315.1
5'-nucleotidase.
     
  0.499
SHH22544.1
Leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.497
SHH22502.1
Uncharacterized membrane protein YqaE, homolog of Blt101, UPF0057 family.
       0.476
SHG60575.1
Catalase; Belongs to the catalase family.
   
   0.436
Your Current Organism:
Hydrocarboniphaga daqingensis
NCBI taxonomy Id: 490188
Other names: CGMCC 1.7049, H. daqingensis, Hydrocarboniphaga daqingensis Liu et al. 2011, Hydrocarboniphaga sp. B2-9, NBRC 104238, strain B2-9
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.