STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH24307.1Cytochrome c, mono-and diheme variants. (428 aa)    
Predicted Functional Partners:
SHH24287.1
Cytochrome c553.
 
  0.993
SHG63696.1
Isoquinoline 1-oxidoreductase, beta subunit.
 
 
 0.953
SHH21858.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.902
SHH03287.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
      0.899
SHG68108.1
Choline dehydrogenase.
  
 
 0.894
SHH21879.1
Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.886
SHH03355.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 0.867
SHH03332.1
Cytochrome c oxidase cbb3-type subunit 2.
  
 0.859
SHG41747.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.797
SHG61599.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.789
Your Current Organism:
Hydrocarboniphaga daqingensis
NCBI taxonomy Id: 490188
Other names: CGMCC 1.7049, H. daqingensis, Hydrocarboniphaga daqingensis Liu et al. 2011, Hydrocarboniphaga sp. B2-9, NBRC 104238, strain B2-9
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