STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH30660.1Alkyl sulfatase BDS1, metallo-beta-lactamase superfamily. (572 aa)    
Predicted Functional Partners:
SHH30688.1
Glutathione S-transferase.
 
     0.880
SHH30711.1
Glutathione S-transferase.
 
     0.860
SHH30816.1
Arylsulfatase.
 
   
 0.775
SHH30736.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.773
SHH30753.1
Protein of unknown function.
 
     0.770
SHH30800.1
PPIC-type PPIASE domain-containing protein.
 
     0.770
SHH30775.1
HupE / UreJ protein.
       0.631
SHH30842.1
Ribonuclease Z.
 
   
 0.604
SHG87008.1
Transcriptional regulator, TetR family.
  
     0.565
SHH19971.1
Amidohydrolase.
  
     0.543
Your Current Organism:
Hydrocarboniphaga daqingensis
NCBI taxonomy Id: 490188
Other names: CGMCC 1.7049, H. daqingensis, Hydrocarboniphaga daqingensis Liu et al. 2011, Hydrocarboniphaga sp. B2-9, NBRC 104238, strain B2-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.