Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCX87339.1 | SCY12532.1 | SAMN02927903_00313 | SAMN02927903_00821 | Fatty acid hydroxylase superfamily protein. | Protein of unknown function. | 0.797 |
SCX87339.1 | SCY23232.1 | SAMN02927903_00313 | SAMN02927903_00978 | Fatty acid hydroxylase superfamily protein. | Hypothetical protein. | 0.694 |
SCY08915.1 | SCY12532.1 | SAMN02927903_00722 | SAMN02927903_00821 | Hypothetical protein. | Protein of unknown function. | 0.787 |
SCY08915.1 | SCY48717.1 | SAMN02927903_00722 | SAMN02927903_01512 | Hypothetical protein. | Protein of unknown function DUF58. | 0.757 |
SCY08915.1 | SCY67522.1 | SAMN02927903_00722 | SAMN02927903_02019 | Hypothetical protein. | Hypothetical protein. | 0.761 |
SCY08915.1 | SCY85969.1 | SAMN02927903_00722 | SAMN02927903_02640 | Hypothetical protein. | Hypothetical protein. | 0.774 |
SCY12485.1 | SCY12532.1 | SAMN02927903_00820 | SAMN02927903_00821 | 16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Protein of unknown function. | 0.826 |
SCY12485.1 | tsaD | SAMN02927903_00820 | SAMN02927903_00819 | 16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.848 |
SCY12532.1 | SCX87339.1 | SAMN02927903_00821 | SAMN02927903_00313 | Protein of unknown function. | Fatty acid hydroxylase superfamily protein. | 0.797 |
SCY12532.1 | SCY08915.1 | SAMN02927903_00821 | SAMN02927903_00722 | Protein of unknown function. | Hypothetical protein. | 0.787 |
SCY12532.1 | SCY12485.1 | SAMN02927903_00821 | SAMN02927903_00820 | Protein of unknown function. | 16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | 0.826 |
SCY12532.1 | SCY23232.1 | SAMN02927903_00821 | SAMN02927903_00978 | Protein of unknown function. | Hypothetical protein. | 0.871 |
SCY12532.1 | SCY41170.1 | SAMN02927903_00821 | SAMN02927903_01362 | Protein of unknown function. | Fatty acid hydroxylase superfamily protein. | 0.797 |
SCY12532.1 | SCY48717.1 | SAMN02927903_00821 | SAMN02927903_01512 | Protein of unknown function. | Protein of unknown function DUF58. | 0.783 |
SCY12532.1 | SCY66456.1 | SAMN02927903_00821 | SAMN02927903_01974 | Protein of unknown function. | Beta-carotene 3-hydroxylase. | 0.797 |
SCY12532.1 | SCY67522.1 | SAMN02927903_00821 | SAMN02927903_02019 | Protein of unknown function. | Hypothetical protein. | 0.789 |
SCY12532.1 | SCY85969.1 | SAMN02927903_00821 | SAMN02927903_02640 | Protein of unknown function. | Hypothetical protein. | 0.781 |
SCY12532.1 | tsaD | SAMN02927903_00821 | SAMN02927903_00819 | Protein of unknown function. | N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.807 |
SCY23232.1 | SCX87339.1 | SAMN02927903_00978 | SAMN02927903_00313 | Hypothetical protein. | Fatty acid hydroxylase superfamily protein. | 0.694 |
SCY23232.1 | SCY12532.1 | SAMN02927903_00978 | SAMN02927903_00821 | Hypothetical protein. | Protein of unknown function. | 0.871 |
page 1 of 2