Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCY21491.1 | SCY21516.1 | SAMN02927903_00927 | SAMN02927903_00928 | Hypothetical protein. | T/G mismatch-specific endonuclease. | 0.506 |
SCY21516.1 | SCY21491.1 | SAMN02927903_00928 | SAMN02927903_00927 | T/G mismatch-specific endonuclease. | Hypothetical protein. | 0.506 |
SCY21516.1 | SCY21552.1 | SAMN02927903_00928 | SAMN02927903_00929 | T/G mismatch-specific endonuclease. | Site-specific recombinase XerD. | 0.542 |
SCY21516.1 | SCY37094.1 | SAMN02927903_00928 | SAMN02927903_01256 | T/G mismatch-specific endonuclease. | DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | 0.586 |
SCY21516.1 | SCY37121.1 | SAMN02927903_00928 | SAMN02927903_01257 | T/G mismatch-specific endonuclease. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.738 |
SCY21516.1 | SCZ00992.1 | SAMN02927903_00928 | SAMN02927903_03351 | T/G mismatch-specific endonuclease. | DNA (cytosine-5)-methyltransferase 1. | 0.716 |
SCY21516.1 | mutL | SAMN02927903_00928 | SAMN02927903_03139 | T/G mismatch-specific endonuclease. | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | 0.672 |
SCY21552.1 | SCY21516.1 | SAMN02927903_00929 | SAMN02927903_00928 | Site-specific recombinase XerD. | T/G mismatch-specific endonuclease. | 0.542 |
SCY37094.1 | SCY21516.1 | SAMN02927903_01256 | SAMN02927903_00928 | DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | T/G mismatch-specific endonuclease. | 0.586 |
SCY37094.1 | SCY37121.1 | SAMN02927903_01256 | SAMN02927903_01257 | DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.798 |
SCY37121.1 | SCY21516.1 | SAMN02927903_01257 | SAMN02927903_00928 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | T/G mismatch-specific endonuclease. | 0.738 |
SCY37121.1 | SCY37094.1 | SAMN02927903_01257 | SAMN02927903_01256 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. | 0.798 |
SCZ00992.1 | SCY21516.1 | SAMN02927903_03351 | SAMN02927903_00928 | DNA (cytosine-5)-methyltransferase 1. | T/G mismatch-specific endonuclease. | 0.716 |
mutL | SCY21516.1 | SAMN02927903_03139 | SAMN02927903_00928 | DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. | T/G mismatch-specific endonuclease. | 0.672 |