STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY40613.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
SCY27067.1
Hypothetical protein.
  
     0.619
SCY07742.1
Protein of unknown function.
  
     0.551
SCY46958.1
Threonine/homoserine/homoserine lactone efflux protein.
  
     0.532
SCY40655.1
Hypothetical protein.
 
     0.518
SCY34298.1
Hypothetical protein.
  
     0.517
SCY49999.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.444
SCY79984.1
Hypothetical protein.
  
     0.443
SCX88658.1
Hypothetical protein.
  
     0.440
SCX77676.1
Protein of unknown function.
  
     0.415
SCY26834.1
Hypothetical protein.
  
     0.408
Your Current Organism:
Flavobacterium caeni
NCBI taxonomy Id: 490189
Other names: CGMCC 1.7031, F. caeni, Flavobacteriaceae bacterium LM5, Flavobacterium caeni Liu et al. 2010 emend. Fujii et al. 2014, NBRC 104239, strain LM5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.