STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY75157.1Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. (1016 aa)    
Predicted Functional Partners:
SCY75087.1
Hypothetical protein.
 
 
 0.999
SCY75108.1
Cytochrome c, mono-and diheme variants.
 
 0.999
SCY75126.1
Protein of unknown function.
 
 0.999
SCY75142.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1.
 
 0.999
SCY75184.1
Cytochrome c2.
 
 0.999
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
 
 0.891
SCY07522.1
Cytochrome c oxidase cbb3-type subunit 3.
 
 0.827
SCY65687.1
Hypothetical protein.
  
 0.800
SCY07558.1
Hypothetical protein.
  
 0.798
SCY65791.1
Conserved hypothetical protein, HNE_0200 family.
  
 0.798
Your Current Organism:
Flavobacterium caeni
NCBI taxonomy Id: 490189
Other names: CGMCC 1.7031, F. caeni, Flavobacteriaceae bacterium LM5, Flavobacterium caeni Liu et al. 2010 emend. Fujii et al. 2014, NBRC 104239, strain LM5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.