STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY86410.1Hypothetical protein. (386 aa)    
Predicted Functional Partners:
SCY86398.1
Predicted membrane protein.
 
     0.951
SCY52361.1
MORN repeat variant.
  
     0.634
SCY86424.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
       0.554
SCY86385.1
CubicO group peptidase, beta-lactamase class C family.
       0.543
SCY86438.1
Hypothetical protein.
       0.537
SCY86452.1
Cysteine desulfuration protein SufE.
       0.537
SCY86470.1
FeS assembly SUF system protein.
       0.537
SCY86485.1
Protein of unknown function.
       0.537
SCY34499.1
Hypothetical protein.
  
     0.506
SCY46204.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
  
     0.479
Your Current Organism:
Flavobacterium caeni
NCBI taxonomy Id: 490189
Other names: CGMCC 1.7031, F. caeni, Flavobacteriaceae bacterium LM5, Flavobacterium caeni Liu et al. 2010 emend. Fujii et al. 2014, NBRC 104239, strain LM5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.