STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCY86424.1Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (404 aa)    
Predicted Functional Partners:
SCY86452.1
Cysteine desulfuration protein SufE.
 0.996
SCY86369.1
Fe-S cluster assembly protein SufD.
 
 
 0.946
SCY86323.1
Iron-regulated ABC transporter membrane component SufB.
 
 
 0.945
SCY86346.1
Iron-regulated ABC transporter ATPase subunit SufC.
 
  
 0.945
SCX77438.1
Thioredoxin reductase (NADPH).
  
 
  0.929
SCY47303.1
Thioredoxin reductase (NADPH).
   
 
  0.920
SCY86470.1
FeS assembly SUF system protein.
 
  
 0.883
SCY86485.1
Protein of unknown function.
       0.778
SCY90029.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
    
   0.766
SCY96753.1
Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family.
    
   0.766
Your Current Organism:
Flavobacterium caeni
NCBI taxonomy Id: 490189
Other names: CGMCC 1.7031, F. caeni, Flavobacteriaceae bacterium LM5, Flavobacterium caeni Liu et al. 2010 emend. Fujii et al. 2014, NBRC 104239, strain LM5
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