STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thrBHomoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. (309 aa)    
Predicted Functional Partners:
SCY89776.1
Aspartate kinase.
 
 0.999
SCY89813.1
Threonine synthase.
 
 0.999
SCY91329.1
Homoserine O-acetyltransferase.
  
 0.997
SCY91345.1
Homoserine dehydrogenase.
 
 0.987
SCY56810.1
Cystathionine beta-lyase.
  
 
 0.932
SCY91371.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
 0.927
SCY00372.1
Branched-chain amino acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.924
SCY89949.1
Cystathionine beta-synthase.
     
 0.919
SCY91302.1
O-acetylhomoserine sulfhydrylase.
    
  0.907
SCY04641.1
L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
  
 
 0.878
Your Current Organism:
Flavobacterium caeni
NCBI taxonomy Id: 490189
Other names: CGMCC 1.7031, F. caeni, Flavobacteriaceae bacterium LM5, Flavobacterium caeni Liu et al. 2010 emend. Fujii et al. 2014, NBRC 104239, strain LM5
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