STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TARUN_10473Cyclopropane-fatty-acyl-phospholipid synthase. (524 aa)    
Predicted Functional Partners:
TARUN_2880
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.828
TARUN_1324
Mapeg family.
    
 0.762
TARUN_7433
Mitochondrial peroxiredoxin prx1.
   
 0.751
TARUN_2207
Glutathione synthetase.
    
 0.743
TARUN_5428
Thioredoxin-like fold; Belongs to the GST superfamily.
   
 
 0.732
TARUN_1207
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.727
TARUN_8452
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
     
 0.724
TARUN_6477
Gamma-glutamyltranspeptidase.
     
 0.676
TARUN_3611
Gamma-glutamyltransferase.
     
 0.676
TARUN_2772
Gamma-glutamyltranspeptidase.
     
 0.676
Your Current Organism:
Trichoderma arundinaceum
NCBI taxonomy Id: 490622
Other names: BPI 878405, CBS 119575, T. arundinaceum, Trichoderma arundinaceum Zafari, Graf. & Samuels, 2008, Trichoderma sp. GJS-2007a
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