STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TARUN_9233Cellular retinaldehyde-binding triple function. (451 aa)    
Predicted Functional Partners:
TARUN_10037
Duf1776-domain-containing protein.
    
 0.650
TARUN_1330
Ap-1 complex subunit gamma-1.
    
 0.630
TARUN_4799
Diacylglycerol o-acyltransferase 2a.
     
 0.607
TARUN_5677
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.602
TARUN_6747
CRAL-TRIO domain-containing protein.
    
 
0.592
TARUN_4659
Mitogen-activated kinase maf1.
     
 0.591
TARUN_8802
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.
    
 0.563
TARUN_3056
Phosphatidylinositol transfer.
    
 
 0.557
TARUN_6764
Choline-phosphate cytidylyltransferase.
    
 
 0.548
TARUN_10155
Uncharacterized protein.
    
 0.547
Your Current Organism:
Trichoderma arundinaceum
NCBI taxonomy Id: 490622
Other names: BPI 878405, CBS 119575, T. arundinaceum, Trichoderma arundinaceum Zafari, Graf. & Samuels, 2008, Trichoderma sp. GJS-2007a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.