STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TARUN_8815Nitrogen metabolic regulation nmr. (316 aa)    
Predicted Functional Partners:
TARUN_5710
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
   
 0.853
TARUN_9998
Nadh-ubiquinone oxidoreductase kDa subunit, mitochondrial; Belongs to the complex I 30 kDa subunit family.
   
 0.851
TARUN_4516
Nadh-ubiquinone oxidoreductase 49 kDa subunit; Belongs to the complex I 49 kDa subunit family.
   
 0.841
TARUN_4221
Nadh-ubiquinone oxidoreductase 23 kDa subunit.
   
 0.840
TARUN_4362
NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.839
TARUN_3147
Cytochrome c1.
   
 0.839
TARUN_3065
Mitochondrial nadh-ubiquinone oxidoreductase 20 kd subunit; Belongs to the complex I 20 kDa subunit family.
   
 0.836
TARUN_5697
Nadh dehydrogenase ubiquinone 1 beta subcomplex 8.
   
 0.831
TARUN_8332
Nadh dehydrogenase.
   
  0.825
TARUN_2696
Nadh-ubiquinone oxidoreductase 51 kDa subunit.
   
 0.818
Your Current Organism:
Trichoderma arundinaceum
NCBI taxonomy Id: 490622
Other names: BPI 878405, CBS 119575, T. arundinaceum, Trichoderma arundinaceum Zafari, Graf. & Samuels, 2008, Trichoderma sp. GJS-2007a
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