Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
TARUN_10170 | TARUN_3647 | A0A395N7I5 | A0A395NRC4 | Acyl-desaturase. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.830 |
TARUN_10170 | TARUN_5611 | A0A395N7I5 | A0A395NL85 | Acyl-desaturase. | Acyl-desaturase; Belongs to the cytochrome b5 family. | 0.833 |
TARUN_10170 | TARUN_8405 | A0A395N7I5 | A0A395NCM4 | Acyl-desaturase. | Transcriptional regulatory. | 0.480 |
TARUN_10170 | TARUN_9552 | A0A395N7I5 | A0A395N9X5 | Acyl-desaturase. | Nitrate reductase. | 0.945 |
TARUN_2794 | TARUN_4384 | A0A395NUE3 | A0A395NPH7 | Dna-directed rna polymerase ii subunit rpb3. | Dna-directed rna polymerases ii 24 kDa polypeptide. | 0.999 |
TARUN_2794 | TARUN_6817 | A0A395NUE3 | A0A395NHL3 | Dna-directed rna polymerase ii subunit rpb3. | Glycoside hydrolase family 18. | 0.852 |
TARUN_2794 | TARUN_7706 | A0A395NUE3 | A0A395NEJ2 | Dna-directed rna polymerase ii subunit rpb3. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
TARUN_2794 | TARUN_8259 | A0A395NUE3 | A0A395NDC2 | Dna-directed rna polymerase ii subunit rpb3. | Udp-glucose 4-epimerase gal10. | 0.999 |
TARUN_2794 | TARUN_8405 | A0A395NUE3 | A0A395NCM4 | Dna-directed rna polymerase ii subunit rpb3. | Transcriptional regulatory. | 0.418 |
TARUN_3647 | TARUN_10170 | A0A395NRC4 | A0A395N7I5 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Acyl-desaturase. | 0.830 |
TARUN_3647 | TARUN_5611 | A0A395NRC4 | A0A395NL85 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Acyl-desaturase; Belongs to the cytochrome b5 family. | 0.834 |
TARUN_3647 | TARUN_8405 | A0A395NRC4 | A0A395NCM4 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Transcriptional regulatory. | 0.480 |
TARUN_3647 | TARUN_9552 | A0A395NRC4 | A0A395N9X5 | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | Nitrate reductase. | 0.945 |
TARUN_4384 | TARUN_2794 | A0A395NPH7 | A0A395NUE3 | Dna-directed rna polymerases ii 24 kDa polypeptide. | Dna-directed rna polymerase ii subunit rpb3. | 0.999 |
TARUN_4384 | TARUN_6817 | A0A395NPH7 | A0A395NHL3 | Dna-directed rna polymerases ii 24 kDa polypeptide. | Glycoside hydrolase family 18. | 0.859 |
TARUN_4384 | TARUN_7706 | A0A395NPH7 | A0A395NEJ2 | Dna-directed rna polymerases ii 24 kDa polypeptide. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
TARUN_4384 | TARUN_8259 | A0A395NPH7 | A0A395NDC2 | Dna-directed rna polymerases ii 24 kDa polypeptide. | Udp-glucose 4-epimerase gal10. | 0.999 |
TARUN_4384 | TARUN_8405 | A0A395NPH7 | A0A395NCM4 | Dna-directed rna polymerases ii 24 kDa polypeptide. | Transcriptional regulatory. | 0.432 |
TARUN_5611 | TARUN_10170 | A0A395NL85 | A0A395N7I5 | Acyl-desaturase; Belongs to the cytochrome b5 family. | Acyl-desaturase. | 0.833 |
TARUN_5611 | TARUN_3647 | A0A395NL85 | A0A395NRC4 | Acyl-desaturase; Belongs to the cytochrome b5 family. | Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates. | 0.834 |
page 1 of 3