STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TARUN_7933Uncharacterized protein; Belongs to the OSBP family. (410 aa)    
Predicted Functional Partners:
TARUN_9723
Sec14 cytosolic factor.
   
 
 0.658
TARUN_10155
Uncharacterized protein.
    
  0.631
TARUN_6405
Oxysterol binding; Belongs to the OSBP family.
    
0.622
TARUN_1934
SSD domain-containing protein.
   
 0.606
TARUN_9570
Uncharacterized protein.
   
  0.597
TARUN_7347
Ras-like c3 botulinum toxin substrate 1.
    
  0.578
TARUN_2457
Oxysterol-binding.
    
0.575
TARUN_9993
Gtp-binding ypt2.
    
 0.558
TARUN_7029
Atp synthase regulation nca2.
    
 0.558
TARUN_10239
Phosphatidylinositol 4-kinase pik1a; Belongs to the PI3/PI4-kinase family.
   
 
 0.556
Your Current Organism:
Trichoderma arundinaceum
NCBI taxonomy Id: 490622
Other names: BPI 878405, CBS 119575, T. arundinaceum, Trichoderma arundinaceum Zafari, Graf. & Samuels, 2008, Trichoderma sp. GJS-2007a
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