STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TARUN_7866Uncharacterized protein. (1446 aa)    
Predicted Functional Partners:
TARUN_9297
Uncharacterized protein.
  
 
  0.564
TARUN_2347
DUF4050 domain-containing protein.
  
 
  0.549
TARUN_7271
Morn repeat.
    
 0.513
TARUN_5282
RanBD1 domain-containing protein.
    
  0.484
TARUN_6295
Uncharacterized protein.
  
 
  0.481
TARUN_6010
Uncharacterized protein.
  
 
  0.469
TARUN_5935
Uncharacterized protein.
  
 
  0.468
TARUN_8965
Uncharacterized protein.
  
 
   0.463
TARUN_1996
Glutamyl-trnagln amidotransferase subunit a.
    
  0.463
TARUN_8808
Uncharacterized protein.
    
  0.450
Your Current Organism:
Trichoderma arundinaceum
NCBI taxonomy Id: 490622
Other names: BPI 878405, CBS 119575, T. arundinaceum, Trichoderma arundinaceum Zafari, Graf. & Samuels, 2008, Trichoderma sp. GJS-2007a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.