STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TARUN_7866Uncharacterized protein. (1446 aa)    
Predicted Functional Partners:
TARUN_9297
Uncharacterized protein.
  
 
  0.530
TARUN_5935
Uncharacterized protein.
  
 
  0.513
TARUN_2347
DUF4050 domain-containing protein.
  
 
  0.504
TARUN_4885
Spindle pole body-associated sad1.
  
 
   0.494
TARUN_2297
Sulfite exporter family.
    
  0.482
TARUN_6295
Uncharacterized protein.
  
 
  0.480
TARUN_1817
Amidase domain-containing protein.
    
  0.478
TARUN_8965
Uncharacterized protein.
  
 
   0.466
TARUN_6010
Uncharacterized protein.
  
 
   0.465
TARUN_1996
Glutamyl-trnagln amidotransferase subunit a.
    
  0.463
Your Current Organism:
Trichoderma arundinaceum
NCBI taxonomy Id: 490622
Other names: BPI 878405, CBS 119575, T. arundinaceum, Trichoderma arundinaceum Zafari, Graf. & Samuels, 2008, Trichoderma sp. GJS-2007a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.