STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TARUN_7600CENP-T_C domain-containing protein. (738 aa)    
Predicted Functional Partners:
TARUN_3385
Apoptosis-inducing taf9-like domain 1 family.
     
 0.829
TARUN_889
Uncharacterized protein.
     
 0.675
TARUN_4492
Cellular morphogenesis.
    
 0.657
TARUN_3680
WW domain-containing protein.
    
 0.657
TARUN_3066
E3 ubiquitin-ligase hula.
    
 0.657
TARUN_2506
Kinetoplast-associated kap.
    
 0.657
TARUN_1225
Uncharacterized protein.
    
 0.657
TARUN_1946
Kinetochore ndc80.
   
 
 0.608
TARUN_10324
Histone H3; Belongs to the histone H3 family.
   
 0.585
TARUN_3380
Uncharacterized protein.
  
   
 0.576
Your Current Organism:
Trichoderma arundinaceum
NCBI taxonomy Id: 490622
Other names: BPI 878405, CBS 119575, T. arundinaceum, Trichoderma arundinaceum Zafari, Graf. & Samuels, 2008, Trichoderma sp. GJS-2007a
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.