STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TARUN_5980Phosphate system cyclin pho80. (382 aa)    
Predicted Functional Partners:
TARUN_1774
Ankyrin repeat nuc-2.
    
 0.971
TARUN_9257
Glycerophosphodiester phosphodiesterase gde1.
    
 0.850
TARUN_1398
Ankyrin repeat-containing.
    
 0.836
TARUN_8078
Negative regulator of the pho system; Belongs to the protein kinase superfamily.
    
 0.831
TARUN_7525
Cell division control 2; Belongs to the protein kinase superfamily.
    
 0.831
TARUN_3287
Atp-dependent dna helicase 2 subunit 2.
    
 0.776
TARUN_9215
DNA ligase.
    
 0.679
TARUN_994
DNA_LIGASE_A3 domain-containing protein.
    
 0.679
TARUN_5978
Uncharacterized protein.
 
      0.665
TARUN_2907
Atp-dependent dna helicase ii subunit 1.
    
 0.662
Your Current Organism:
Trichoderma arundinaceum
NCBI taxonomy Id: 490622
Other names: BPI 878405, CBS 119575, T. arundinaceum, Trichoderma arundinaceum Zafari, Graf. & Samuels, 2008, Trichoderma sp. GJS-2007a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.