STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TARUN_4261Transferase family. (1553 aa)    
Predicted Functional Partners:
TARUN_1591
Tryptophan synthase.
  
 
 0.855
TARUN_4219
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.847
TARUN_6924
Histidine biosynthesis trifunctional protein.
   
  
 0.803
TARUN_10042
Uncharacterized protein.
   
  0.549
TARUN_8253
Peroxisomal-coenzyme a synthetase.
   
  0.549
TARUN_7955
N-terminal binuclear zn cluster-containing dna binding domain-containing.
   
  0.549
TARUN_7383
Fungal specific transcription factor domain-containing.
   
  0.549
TARUN_6629
Uncharacterized protein.
   
  0.549
TARUN_6796
Acyl-synthetase.
   
  0.549
TARUN_6344
N-terminal binuclear zn cluster-containing.
   
  0.549
Your Current Organism:
Trichoderma arundinaceum
NCBI taxonomy Id: 490622
Other names: BPI 878405, CBS 119575, T. arundinaceum, Trichoderma arundinaceum Zafari, Graf. & Samuels, 2008, Trichoderma sp. GJS-2007a
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.