STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TARUN_2741Long-chain acyl-synthetase. (553 aa)    
Predicted Functional Partners:
TARUN_2742
Long-chain acyl-synthetase.
 
      0.899
TARUN_5310
Amp-binding enzyme.
  
 
0.827
TARUN_2913
Fatty acid synthase subunit beta; Belongs to the fungal fatty acid synthetase subunit beta family.
   
 0.808
TARUN_2912
Fatty acid synthase subunit alpha; Belongs to the thiolase-like superfamily. Fungal fatty acid synthetase subunit alpha family.
   
 0.808
TARUN_5207
Palmitoyl thioesterase.
     
 0.807
TARUN_108
Uncharacterized protein.
  
 0.788
TARUN_4309
Patatin-like serine hydrolase.
  
 
 0.754
TARUN_6772
Triacylglycerol lipase.
     
 0.749
TARUN_7434
Patatin-like phospholipase domain-containing protein; Lipid hydrolase; Belongs to the PLPL family.
  
 
 0.745
TARUN_2780
Nonspecific lipid-transfer, mitochondrial; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.733
Your Current Organism:
Trichoderma arundinaceum
NCBI taxonomy Id: 490622
Other names: BPI 878405, CBS 119575, T. arundinaceum, Trichoderma arundinaceum Zafari, Graf. & Samuels, 2008, Trichoderma sp. GJS-2007a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.