STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TARUN_1531Regulatory leu3. (718 aa)    
Predicted Functional Partners:
TARUN_8516
Replication fork protection complex subunit tof1 swi1.
    
 0.798
TARUN_9436
Ck1 ck1 ck1-d kinase; Belongs to the protein kinase superfamily.
    
 0.747
TARUN_7809
Casein kinase i isoform delta.
    
 0.747
TARUN_5142
Zinc finger, ring fyve phd-type.
    
 0.669
TARUN_10376
Uncharacterized protein.
  
 
 0.655
TARUN_8731
F-box domain-containing.
    
 0.576
TARUN_585
Cyclic nucleotide-binding domain-containing.
    
 0.576
TARUN_10397
Uncharacterized protein.
    
 0.569
TARUN_10382
Uncharacterized protein.
    
 0.569
TARUN_9697
Uncharacterized protein.
    
 0.569
Your Current Organism:
Trichoderma arundinaceum
NCBI taxonomy Id: 490622
Other names: BPI 878405, CBS 119575, T. arundinaceum, Trichoderma arundinaceum Zafari, Graf. & Samuels, 2008, Trichoderma sp. GJS-2007a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.