STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TARUN_1422Uncharacterized protein. (310 aa)    
Predicted Functional Partners:
TARUN_8921
Gtp cyclohydrolase-1.
    
 0.821
TARUN_974
Nucleoside diphosphate kinase.
   
  0.778
TARUN_5257
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.753
TARUN_1256
Glucoamylase.
   
 0.741
TARUN_6714
Molybdenum cofactor biosynthesis 1 b.
    
  0.731
TARUN_10427
Nudix hydrolase domain-containing protein; Belongs to the Nudix hydrolase family.
    
  0.707
TARUN_8618
Nudix domain-containing.
    
  0.707
TARUN_2098
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
 
  0.671
TARUN_8935
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
   
    0.655
TARUN_6924
Histidine biosynthesis trifunctional protein.
    
  0.567
Your Current Organism:
Trichoderma arundinaceum
NCBI taxonomy Id: 490622
Other names: BPI 878405, CBS 119575, T. arundinaceum, Trichoderma arundinaceum Zafari, Graf. & Samuels, 2008, Trichoderma sp. GJS-2007a
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