STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB33530.1Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (338 aa)    
Predicted Functional Partners:
SFB33511.1
Peptide/nickel transport system permease protein.
 
 0.991
SFB33498.1
Peptide/nickel transport system permease protein/oligopeptide transport system permease protein.
 
 0.979
SFA82315.1
Peptide/nickel transport system permease protein.
 
 0.970
SFB54356.1
Peptide/nickel transport system permease protein.
 
 0.970
SFB59601.1
Peptide/nickel transport system permease protein.
 
 0.954
SFB33476.1
Peptide/nickel transport system substrate-binding protein.
 
 
 0.953
SFA71552.1
Peptide/nickel transport system permease protein.
 
 0.923
SFB33522.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.919
SFA77944.1
Peptide/nickel transport system permease protein.
 
 0.918
SFB59606.1
Peptide/nickel transport system permease protein.
 
 0.912
Your Current Organism:
Amycolatopsis marina
NCBI taxonomy Id: 490629
Other names: Amycolatopsis marina Bian et al. 2009, CGMCC 4.3568, JCM 16121, NBRC 104263, strain Ms392A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.