STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB47967.1Dehydrogenase (flavoprotein). (399 aa)    
Predicted Functional Partners:
SFB15189.1
Electron transfer flavoprotein beta subunit.
  
 
 0.906
SFB53609.1
Electron transfer flavoprotein beta subunit.
  
 
 0.906
SFA72088.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 
 0.890
SFB15172.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
 
 0.833
SFB48000.1
Hypothetical protein.
 
    0.830
SFB47982.1
Alpha/beta hydrolase family protein.
  
    0.775
SFB47976.1
Hypothetical protein.
       0.773
SFB47990.1
ATP-binding cassette, subfamily B.
       0.773
SFA94373.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
  0.742
SFB53551.1
4-hydroxyphenylacetate 3-monooxygenase.
     
 0.737
Your Current Organism:
Amycolatopsis marina
NCBI taxonomy Id: 490629
Other names: Amycolatopsis marina Bian et al. 2009, CGMCC 4.3568, JCM 16121, NBRC 104263, strain Ms392A
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