STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFB57880.1Protein of unknown function DUF58. (337 aa)    
Predicted Functional Partners:
SFB57885.1
Ca-activated chloride channel family protein.
 
  
 0.988
SFB57877.1
MoxR-like ATPase.
  
 0.974
SFB35937.1
MoxR-like ATPase.
  
 0.711
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
      
 0.706
SFB46634.1
MoxR-like ATPase.
  
 0.704
SFB51251.1
MoxR-like ATPase.
  
 0.666
egtD
L-histidine Nalpha-methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
      
 0.583
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
      
 0.576
SFB61085.1
Arsenite efflux ATP-binding protein ArsA.
  
   
 0.557
SFB57872.1
Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
       0.514
Your Current Organism:
Amycolatopsis marina
NCBI taxonomy Id: 490629
Other names: Amycolatopsis marina Bian et al. 2009, CGMCC 4.3568, JCM 16121, NBRC 104263, strain Ms392A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.