STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH98851.1Enoyl-CoA hydratase/carnithine racemase. (261 aa)    
Predicted Functional Partners:
SDI89993.1
Signal transduction histidine kinase.
   
 0.973
SDH94276.1
PAS domain S-box-containing protein.
   
 0.971
SDI98717.1
PAS domain S-box-containing protein.
   
 0.971
SDJ47273.1
CHASE domain-containing protein.
   
 0.971
SDI89017.1
Hypothetical protein.
   
 0.969
SDI92976.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.942
SDH97968.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
0.751
SDJ05913.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
0.732
SDJ27575.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
     0.729
SDJ27540.1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
  0.668
Your Current Organism:
Lutimaribacter saemankumensis
NCBI taxonomy Id: 490829
Other names: CCUG 55760, DSM 28010, KCTC 22244, L. saemankumensis, Lutimaribacter saemankumensis Yoon et al. 2009, strain SMK-117
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