STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI11100.1Uncharacterized conserved protein, Alpha-E superfamily. (313 aa)    
Predicted Functional Partners:
SDI11139.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
  
 0.996
SDI11064.1
Transglutaminase-like enzyme, putative cysteine protease.
  
 0.974
SDI11037.1
Putative proteasome-type protease.
 
    0.960
SDJ34992.1
Transglutaminase-like enzyme, putative cysteine protease.
 
  
 0.808
SDH92576.1
Transglutaminase-like superfamily protein.
 
  
 0.807
SDJ26219.1
Transglutaminase-like enzyme, putative cysteine protease.
 
  
 0.802
SDJ35050.1
Transglutaminase-like enzyme, putative cysteine protease.
 
  
 0.736
SDI11012.1
Glutamate or tyrosine decarboxylase.
       0.540
SDI10978.1
UDP-glucuronate 4-epimerase.
       0.478
SDI11174.1
Uncharacterized membrane protein.
       0.468
Your Current Organism:
Lutimaribacter saemankumensis
NCBI taxonomy Id: 490829
Other names: CCUG 55760, DSM 28010, KCTC 22244, L. saemankumensis, Lutimaribacter saemankumensis Yoon et al. 2009, strain SMK-117
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.