STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI12230.1Hypothetical protein. (895 aa)    
Predicted Functional Partners:
SDI89017.1
Hypothetical protein.
  
0.988
SDI73961.1
Hypothetical protein.
 
 0.986
SDI10916.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
  
 0.978
SDJ47273.1
CHASE domain-containing protein.
 
 0.978
SDH94276.1
PAS domain S-box-containing protein.
 
0.971
SDI98717.1
PAS domain S-box-containing protein.
 
0.970
SDI12279.1
Response regulator receiver domain-containing protein.
 
 0.959
SDI89993.1
Signal transduction histidine kinase.
  
0.956
SDI12249.1
Hypothetical protein.
  
    0.945
SDJ17509.1
PAS fold-containing protein.
 
0.917
Your Current Organism:
Lutimaribacter saemankumensis
NCBI taxonomy Id: 490829
Other names: CCUG 55760, DSM 28010, KCTC 22244, L. saemankumensis, Lutimaribacter saemankumensis Yoon et al. 2009, strain SMK-117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.