STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureEUrease accessory protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family. (167 aa)    
Predicted Functional Partners:
ureF
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
  
 0.998
ureG
Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
 
 0.996
ureC
Urease subunit alpha.
 
  
 0.995
ureB
Urease subunit beta; Belongs to the urease beta subunit family.
 
  
 0.985
ureA
Urease subunit gamma; Belongs to the urease gamma subunit family.
 
  
 0.976
ureD
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
  
 0.970
SDI37022.1
Hypothetical protein.
       0.594
SDI76363.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.588
Your Current Organism:
Lutimaribacter saemankumensis
NCBI taxonomy Id: 490829
Other names: CCUG 55760, DSM 28010, KCTC 22244, L. saemankumensis, Lutimaribacter saemankumensis Yoon et al. 2009, strain SMK-117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.