STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI50970.1Hypothetical protein. (114 aa)    
Predicted Functional Partners:
SDI50997.1
Hypothetical protein.
       0.773
SDI19010.1
Hypothetical protein.
  
     0.768
SDJ08965.1
Hypothetical protein.
  
     0.759
SDI28585.1
SseB protein N-terminal domain-containing protein.
  
     0.746
SDI51027.1
propionyl-CoA carboxylase alpha chain.
       0.744
SDI29479.1
Rhomboid family protein.
  
     0.721
SDI30030.1
Exodeoxyribonuclease-5.
  
     0.707
SDJ02960.1
Glycine oxidase.
  
     0.686
SDI65651.1
Hypothetical protein.
  
     0.671
SDI05410.1
Hypothetical protein.
  
     0.639
Your Current Organism:
Lutimaribacter saemankumensis
NCBI taxonomy Id: 490829
Other names: CCUG 55760, DSM 28010, KCTC 22244, L. saemankumensis, Lutimaribacter saemankumensis Yoon et al. 2009, strain SMK-117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.