STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI52067.1Polar amino acid transport system permease protein. (268 aa)    
Predicted Functional Partners:
SDI52170.1
Polar amino acid transport system substrate-binding protein.
 
 0.991
SDI52205.1
Polar amino acid transport system ATP-binding protein.
 0.991
SDJ13871.1
L-glutamine ABC transporter ATP-binding protein.
 0.989
SDI52133.1
Polar amino acid transport system permease protein.
    0.936
SDJ13806.1
General L-amino acid transport system permease protein.
 
 
 0.898
SDJ40031.1
ABC-type amino acid transport substrate-binding protein.
 
 0.891
SDJ13769.1
L-glutamine-binding protein /L-glutamate-binding protein /L-aspartate-binding protein /L-asparagine-binding protein.
 
 0.820
SDJ13838.1
General L-amino acid transport system permease protein.
 
 
 
0.770
SDI52021.1
Glutamine synthetase.
  
  
 0.570
SDI52097.1
Tellurite resistance protein TerB.
       0.554
Your Current Organism:
Lutimaribacter saemankumensis
NCBI taxonomy Id: 490829
Other names: CCUG 55760, DSM 28010, KCTC 22244, L. saemankumensis, Lutimaribacter saemankumensis Yoon et al. 2009, strain SMK-117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.