STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI46544.1Predicted secreted protein. (94 aa)    
Predicted Functional Partners:
SDI46517.1
methylmalonyl-CoA epimerase /ethylmalonyl-CoA epimerase.
       0.832
SDI46495.1
Response regulator receiver domain-containing protein.
 
     0.604
SDI01044.1
Hypothetical protein.
  
     0.576
SDI90453.1
Hypothetical protein.
  
     0.554
SDJ01274.1
Hypothetical protein.
  
     0.531
SDI12249.1
Hypothetical protein.
  
     0.492
SDI67675.1
Hypothetical protein.
  
     0.488
SDI56816.1
Uncharacterized membrane protein.
  
     0.477
SDJ33579.1
SlyX protein.
  
     0.446
SDI27866.1
Group 4 capsule polysaccharide lipoprotein gfcB, YjbF.
  
     0.444
Your Current Organism:
Lutimaribacter saemankumensis
NCBI taxonomy Id: 490829
Other names: CCUG 55760, DSM 28010, KCTC 22244, L. saemankumensis, Lutimaribacter saemankumensis Yoon et al. 2009, strain SMK-117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.