STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI75590.1Phospholipid-binding lipoprotein MlaA. (269 aa)    
Predicted Functional Partners:
SDI75627.1
Phospholipid transport system substrate-binding protein.
 
 
 
 0.980
SDI87779.1
Outer membrane protein OmpU.
   
 
 0.952
SDI28344.1
Alginate export.
    
 
 0.939
SDI12752.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
   
 0.833
SDI10149.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
   
 0.793
SDI10116.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
   
 0.771
SDI75559.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
       0.589
SDI75519.1
Glycerophosphoryl diester phosphodiesterase.
       0.560
lptD
LPS-assembly protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
 
   
 0.506
SDI75457.1
4a-hydroxytetrahydrobiopterin dehydratase.
       0.486
Your Current Organism:
Lutimaribacter saemankumensis
NCBI taxonomy Id: 490829
Other names: CCUG 55760, DSM 28010, KCTC 22244, L. saemankumensis, Lutimaribacter saemankumensis Yoon et al. 2009, strain SMK-117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.