STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI85656.1Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family. (265 aa)    
Predicted Functional Partners:
SDI65431.1
Cupin domain protein.
 
  
 0.638
SDI65091.1
Predicted HD phosphohydrolase.
 
  
  0.627
SDI85602.1
Hypothetical protein.
       0.541
SDI85630.1
Threonine/homoserine/homoserine lactone efflux protein.
       0.541
SDI18610.1
D-lactate dehydrogenase (cytochrome).
   
 0.485
SDI33438.1
Glycolate oxidase FAD binding subunit.
   
 0.485
SDI33464.1
Glycolate oxidase.
   
 0.485
SDI67910.1
FAD/FMN-containing dehydrogenase.
   
 0.485
SDI85491.1
FAD/FMN-containing dehydrogenase.
   
 0.485
SDJ14833.1
FAD/FMN-containing dehydrogenase.
   
 0.485
Your Current Organism:
Lutimaribacter saemankumensis
NCBI taxonomy Id: 490829
Other names: CCUG 55760, DSM 28010, KCTC 22244, L. saemankumensis, Lutimaribacter saemankumensis Yoon et al. 2009, strain SMK-117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.