STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI96539.1Cation diffusion facilitator family transporter. (318 aa)    
Predicted Functional Partners:
SDJ26309.1
Cu+-exporting ATPase.
 
 
 0.963
SDI00448.1
Cu+-exporting ATPase.
  
 
 0.952
SDI74266.1
Cu2+-exporting ATPase.
  
 
 0.941
SDI96695.1
Au+-exporting ATPase.
  
 
 0.941
SDI89524.1
Cobalt-zinc-cadmium efflux system protein.
 
   
 0.725
SDI96621.1
Cobalt-zinc-cadmium efflux system protein.
 
   
 0.691
SDI01203.1
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.656
SDI40633.1
ArsR family transcriptional regulator.
  
  
 0.627
SDI27112.1
Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.610
SDI38164.1
Nitrite reductase (NO-forming); Belongs to the multicopper oxidase family.
  
 
 0.573
Your Current Organism:
Lutimaribacter saemankumensis
NCBI taxonomy Id: 490829
Other names: CCUG 55760, DSM 28010, KCTC 22244, L. saemankumensis, Lutimaribacter saemankumensis Yoon et al. 2009, strain SMK-117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.