STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI97967.1ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. (94 aa)    
Predicted Functional Partners:
SDI97941.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 0.999
SDI97995.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 0.999
SDI98025.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
 0.999
SDI98051.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 0.998
SDI65271.1
acyl-CoA thioesterase.
 
 
 0.976
SDI65238.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
 
  
 0.883
SDH97968.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.858
SDI65313.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.855
SDI36686.1
Vanillate O-demethylase ferredoxin subunit.
  
 
 0.838
SDI90535.1
Reductive dehalogenase.
  
 
 0.838
Your Current Organism:
Lutimaribacter saemankumensis
NCBI taxonomy Id: 490829
Other names: CCUG 55760, DSM 28010, KCTC 22244, L. saemankumensis, Lutimaribacter saemankumensis Yoon et al. 2009, strain SMK-117
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