STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ07429.13-oxoadipate enol-lactonase. (262 aa)    
Predicted Functional Partners:
SDJ07399.1
4-carboxymuconolactone decarboxylase.
 
 0.999
SDJ17000.1
4-carboxymuconolactone decarboxylase.
 
  
 0.993
SDJ07241.1
3-carboxy-cis,cis-muconate cycloisomerase.
 
 0.972
SDJ07371.1
Protocatechuate 3,4-dioxygenase beta subunit.
 
  
 0.969
SDJ07336.1
Protocatechuate 3,4-dioxygenase alpha subunit.
 
  
 0.962
SDJ07458.1
P-hydroxybenzoate 3-monooxygenase.
 
 
 0.948
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.870
SDI13440.1
4-carboxymuconolactone decarboxylase.
     
 0.837
SDI61795.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
 0.736
SDI03805.1
Acetate CoA/acetoacetate CoA-transferase alpha subunit.
  
 
 0.696
Your Current Organism:
Lutimaribacter saemankumensis
NCBI taxonomy Id: 490829
Other names: CCUG 55760, DSM 28010, KCTC 22244, L. saemankumensis, Lutimaribacter saemankumensis Yoon et al. 2009, strain SMK-117
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