STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ37031.1Branched-chain amino acid transport system permease protein/urea transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (292 aa)    
Predicted Functional Partners:
SDJ37066.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
SDJ36999.1
Branched-chain amino acid transport system ATP-binding protein.
 
  0.996
SDJ36940.1
Branched-chain amino acid transport system substrate-binding protein.
 
 
 0.989
SDJ05747.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.987
SDJ36967.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.970
SDI36234.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.948
SDI88384.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.907
SDJ05719.1
Branched-chain amino acid transport system ATP-binding protein.
 
 0.894
SDI36208.1
Branched-chain amino acid transport system ATP-binding protein.
 
  0.890
SDI73813.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.872
Your Current Organism:
Lutimaribacter saemankumensis
NCBI taxonomy Id: 490829
Other names: CCUG 55760, DSM 28010, KCTC 22244, L. saemankumensis, Lutimaribacter saemankumensis Yoon et al. 2009, strain SMK-117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.