STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ40479.1Pimeloyl-ACP methyl ester carboxylesterase. (274 aa)    
Predicted Functional Partners:
SDI61795.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
 0.736
SDJ27064.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.698
SDJ27892.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
  
     0.678
SDJ40514.1
Sugar phosphate permease.
 
     0.640
SDJ27601.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.573
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.563
SDJ41952.1
Esterase/lipase superfamily enzyme.
  
     0.547
SDJ27000.1
Hypothetical protein.
  
   0.513
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
   
  0.495
SDH95806.1
Acyl carrier protein.
    
  0.478
Your Current Organism:
Lutimaribacter saemankumensis
NCBI taxonomy Id: 490829
Other names: CCUG 55760, DSM 28010, KCTC 22244, L. saemankumensis, Lutimaribacter saemankumensis Yoon et al. 2009, strain SMK-117
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.