STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ43937.1Peptide/nickel transport system ATP-binding protein/glutathione transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (609 aa)    
Predicted Functional Partners:
SDJ43904.1
Peptide/nickel transport system permease protein.
 
  0.975
SDI40030.1
Peptide/nickel transport system permease protein.
 
  0.953
SDI37773.1
Peptide/nickel transport system permease protein.
 
  0.944
SDH95522.1
Peptide/nickel transport system permease protein.
 
  0.938
SDI97126.1
Peptide/nickel transport system permease protein.
 
  0.933
SDI88141.1
Peptide/nickel transport system permease protein.
 
 
  0.927
SDJ06165.1
Peptide/nickel transport system permease protein.
 
  0.883
SDH93950.1
Peptide/nickel transport system permease protein.
 
  0.868
SDI14936.1
Peptide/nickel transport system permease protein.
 
  0.853
SDI04643.1
Biotin transport system permease protein.
  
 0.816
Your Current Organism:
Lutimaribacter saemankumensis
NCBI taxonomy Id: 490829
Other names: CCUG 55760, DSM 28010, KCTC 22244, L. saemankumensis, Lutimaribacter saemankumensis Yoon et al. 2009, strain SMK-117
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